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BIOINF-farma automates neoantigen prioritization via unified platform

A new bioinformatics platform, BIOINF-farma, automates neoantigen candidate prioritization by integrating immunogenicity predictions with recombinant protein developability metrics.bioRxiv

This unified approach addresses the fragmentation in current discovery workflows by combining epitope prediction with structural feasibility assessments.

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AI / MethodsyesterdayNew

Bioinf-Farma: supervised integration of epitope prediction and recombinant protein developability for automated vaccine candidate prioritization

BIOINF-farma is a modular platform that integrates epitope prediction and developability assessment to streamline antigen selection. It combines structure-based conformational epitope signals (MLCE/REBELOT-BEPPE) and sequence-based linear epitope propensity scores (BepiPred 3.0) into a unified Antigenicity Score. The system also employs supervised Random Forest meta-learners to evaluate developability, automatically sourcing or predicting protein structures via AlphaFold DB or Boltz-2 when experimental data is unavailable.

biorxiv · yesterday · Bondi, H.; Crespi, M.; Orlando, M.; Lescai, F.; Serapian, S. A.; Colombo, G.; Fasano, M.;